SPECstorage™ Solution 2020_genomics Result: Super Micro Computer

Super Micro Computer	SPECstorage Solution 2020_genomics = 250 Jobs
AS-1115CS-TNR	Overall Response Time = 0.08 msec

Business Metric (Jobs)	Average Latency (msec)	Jobs Ops/Sec	Jobs MB/Sec
10	0.070	10000	849
20	0.064	20000	1697
30	0.062	30000	2548
40	0.063	40000	3399
50	0.063	50001	4247
60	0.063	60001	5097
70	0.064	70001	5943
80	0.066	80001	6797
90	0.068	90002	7640
100	0.069	100002	8494
110	0.071	110002	9342
120	0.073	120002	10192
130	0.075	130002	11042
140	0.078	140002	11889
150	0.081	150002	12743
160	0.084	160002	13590
170	0.087	170002	14437
180	0.092	180004	15293
190	0.096	190004	16140
200	0.102	200004	16989
210	0.106	210002	17836
220	0.112	220003	18685
230	0.121	230002	19533
240	0.129	240002	20379
250	0.141	250003	21231

Product and Test Information

AS-1115CS-TNR
Tested by	Super Micro Computer
Hardware Available	09/2024
Software Available	09/2024
Date Tested	09/2024
License Number	91
Licensee Locations	San Jose, CA

This AS-1115CS-TNR DC 1U rackserver is powered by AMD EPYC 5th generation 9355P processor with 32 cores. The system provides more processing power when SMT is enabled (in BIOS) by providing 64 CPU threads. The system has 12x 64GB DDR5 DIMMS configured @ 6000MT/s speed. It supports 10 2.5" local NVMe drive bays, four USB ports and 860W Platinum Redundant Power supplies.

Solution Under Test Bill of Materials

Item No	Qty	Type	Vendor	Model/Name	Description
1	1	1U Rackserver	Supermicro	AS-1115CS-TNR	This is a Supermicro 1U Rackmount server powered by single AMD EPYC 5th generation 9355P (32cores). This system supports 10 2.5" hot-swap NVMe drive bays. One drive was used for Ubuntu 24.04.1 OS and nine drives were used for this performance testing.

Configuration Diagrams

Component Software

Hardware Configuration and Tuning - Physical

Item No	Component	Type	Name and Version	Description
1	SUT	Linux	Ubuntu 24.04.1	Operating system for load generation and benchmark execution.

Component Name
Parameter Name	Value	Description
N/A	N/A	N/A

Hardware Configuration and Tuning Notes

BIOS Settings: Simultaneous Multi Threading(SMT) was enabled to provide 64 cpu threads support. Power Determinism was set to 300 for both TDP and TPT Control.

Software Configuration and Tuning - Physical

Component Name
Parameter Name	Value	Description
vm.swappiness	10	Reduce the VM swappiness

Software Configuration and Tuning Notes

Pass-thru IOMMU was enabled in the OS boot parameter. Added the following line into /etc/default/grub file. GRUB_CMDLINE_LINUX_DEFAULT="iommu=pt".

Service SLA Notes

None

Storage and Filesystems

Item No	Description	Data Protection	Stable Storage	Qty
1	SSD SAMSUNG MZWLO3T8HCLS-00A07, NVMe, Gen5, 3.84TB Disks	RAID0	Stable Storage	9
2	SSD,3.84TB OS Disk	EXT4 with Journaling	Stable Storage	1

Number of Filesystems	2
Total Capacity	35T
Filesystem Type	EXT4

Filesystem Creation Notes

Software RAID0 was created by running mdadm command on the local 9 NVMe disks. Filesystem was created using mkfs.ext4 command on the RAID0 device for benchmarking.

Storage and Filesystem Notes

The EXT4 filesystem was mounted with noatime,defaults options.

Transport Configuration - Physical

Switches - Physical

Processing Elements - Physical

Item No	Transport Type	Number of Ports Used	Notes
1	N/A	N/A	N/A

Item No	Switch Name	Switch Type	Total Port Count	Used Port Count	Notes
1	N/A	N/A	N/A	N/A	N/A

Item No	Qty	Type	Location	Description	Processing Function
1	1	CPU	System Under Test	AMD EPYC Gen5 9355P	RAID0, Storage functions

Processing Element Notes

N/A

Memory - Physical

Description	Size in GiB	Number of Instances	Nonvolatile	Total GiB
2Rx8 PC5-6400B-R	64	12	V	768
Grand Total Memory Gibibytes				768

Memory Notes

System supports 12 DIMMs.

Stable Storage

Solution Under Test Configuration Notes

The benchmark was ran on a single Supermicro 1U AS-1115CS-TNR Rackmount server powered by AMD EPYC 9355P (32cores) processor. It has 10 local NVMe storage disks. RAID0 config was created using 9 NVMe drives and EXT4 file system was setup on the RAID0. Ubuntu 24.04.1 OS was installed on a local NVMe drive. There were no additional external clients or storage devices or network devices were connected to this setup. The testing was done with SMT enabled in BIOS, providing 64 cpu threads for more processing power.

Other Solution Notes

Dataflow

This single server setup has a RAID0 partition created on the local storage drives and EXT4 file system was created on the RAID. Data gets written directly on to the EXT4 filesystem and on to the NVMe storage devices.

No other external storage device was used.

Other Notes

The benchmark was ran on a single Supermicro AS-1115CS-TNR server using its local NVMe drives. Benchmarking was performed on Ubuntu 24.04.1 OS using 6.8.0-45-generic kernel. XFS file system had some issue so EXT4 was used for this benchmarking. No other client system, or external storage device or networking device was connected to this test system. Vulnerabilities: Gather data sampling: Not affected Itlb multihit: Not affected L1tf: Not affected Mds: Not affected Meltdown: Not affected Mmio stale data: Not affected Reg file data sampling: Not affected Retbleed: Not affected Spec rstack overflow: Not affected Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization Spectre v2: Mitigation; Enhanced / Automatic IBRS; IBPB conditional; STIBP always-on; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected Srbds: Not affected Tsx async abort: Not affected

Other Report Notes

Supermicro is a registered trademark of Super Micro Computer, San Jose, CA 95131. EPYC is a registered trademark of Advanced Micro Devices, Inc, Santa Clara, CA 95054. AMD is a registered trademark of Advanced Micro Devices, Inc, Santa Clara, CA 95054.

SPECstorage™ Solution 2020_genomics Result

Performance