SPEC® CFP2006 Result

Copyright 2006-2015 Standard Performance Evaluation Corporation

Supermicro

SuperServer 2048U-RTR4
(X10QRH+ , Intel Xeon E5-4620 v3)

CPU2006 license: 001176 Test date: Jun-2015
Test sponsor: Supermicro Hardware Availability: Jun-2015
Tested by: Supermicro Software Availability: Oct-2014
Benchmark results graph
Hardware
CPU Name: Intel Xeon E5-4620 v3
CPU Characteristics: Intel Turbo Boost Technology up to 2.60 GHz
CPU MHz: 2000
FPU: Integrated
CPU(s) enabled: 40 cores, 4 chips, 10 cores/chip, 2 threads/core
CPU(s) orderable: 1,2,4 chips
Primary Cache: 32 KB I + 32 KB D on chip per core
Secondary Cache: 256 KB I+D on chip per core
L3 Cache: 25 MB I+D on chip per chip
Other Cache: None
Memory: 512 GB (32 x 16 GB 2Rx4 PC4-2133P-R, running at
1866 MHz)
Disk Subsystem: 1 x 512 GB SATA III, SSD
Other Hardware: None
Software
Operating System: SUSE Linux Enterprise Server 12,
Kernel 3.12.28-4-default
Compiler: C/C++: Version 15.0.0.090 of Intel C++ Studio XE
for Linux;
Fortran: Version 15.0.0.090 of Intel Fortran
Studio XE for Linux
Auto Parallel: No
File System: ext4
System State: Run level 3 (multi-user)
Base Pointers: 32/64-bit
Peak Pointers: 32/64-bit
Other Software: None

Results Table

Benchmark Base Peak
Copies Seconds Ratio Seconds Ratio Seconds Ratio Copies Seconds Ratio Seconds Ratio Seconds Ratio
Results appear in the order in which they were run. Bold underlined text indicates a median measurement.
410.bwaves 80 1083 1000 1084 1000 1085 1000 80 1083 1000 1084 1000 1085 1000
416.gamess 80 1336 1170 1347 1160 1349 1160 80 1278 1230 1279 1220 1283 1220
433.milc 80 748 982 748 982 749 981 80 748 982 748 982 748 982
434.zeusmp 80 534 1360 536 1360 533 1370 80 534 1360 536 1360 533 1370
435.gromacs 80 435 1310 437 1310 435 1310 80 427 1340 427 1340 426 1340
436.cactusADM 80 610 1570 607 1570 608 1570 80 610 1570 607 1570 608 1570
437.leslie3d 80 1063 708 1059 710 1060 709 40 494 761 495 760 494 761
444.namd 80 684 938 686 935 691 929 80 688 933 680 944 684 938
447.dealII 80 529 1730 523 1750 523 1750 80 529 1730 523 1750 523 1750
450.soplex 80 940 710 941 709 943 708 40 440 759 439 760 441 757
453.povray 80 274 1560 279 1520 274 1560 80 246 1730 240 1770 240 1770
454.calculix 80 395 1670 396 1670 397 1660 80 395 1670 396 1670 397 1660
459.GemsFDTD 80 1246 681 1248 680 1246 681 80 1246 681 1248 680 1246 681
465.tonto 80 643 1220 638 1230 638 1230 80 599 1320 600 1310 600 1310
470.lbm 80 826 1330 827 1330 825 1330 80 826 1330 827 1330 825 1330
481.wrf 80 752 1190 750 1190 753 1190 80 744 1200 743 1200 744 1200
482.sphinx3 80 1394 1120 1402 1110 1403 1110 80 1408 1110 1419 1100 1416 1100

Submit Notes

 The numactl mechanism was used to bind copies to processors. The config file option 'submit'
 was used to generate numactl commands to bind each copy to a specific processor.
 For details, please see the config file.

Operating System Notes

 Stack size set to unlimited using "ulimit -s unlimited"

Platform Notes

 BIOS Settings:
 COD Enable = Enable
 Early Snoop = Disable
 Enforce POR = Disabled
 Sysinfo program /home/SPEC2K6/SPEC2006-V12/config/sysinfo.rev6914
 $Rev: 6914 $ $Date:: 2014-06-25 #$ e3fbb8667b5a285932ceab81e28219e1
 running on 21-234 Sat Jun 20 00:55:57 2015

 This section contains SUT (System Under Test) info as seen by
 some common utilities.  To remove or add to this section, see:
   http://www.spec.org/cpu2006/Docs/config.html#sysinfo

 From /proc/cpuinfo
    model name : Intel(R) Xeon(R) CPU E5-4620 v3 @ 2.00GHz
       4 "physical id"s (chips)
       80 "processors"
    cores, siblings (Caution: counting these is hw and system dependent.  The
    following excerpts from /proc/cpuinfo might not be reliable.  Use with
    caution.)
       cpu cores : 10
       siblings  : 20
       physical 0: cores 0 1 2 3 4 8 9 10 11 12
       physical 1: cores 0 1 2 3 4 8 9 10 11 12
       physical 2: cores 0 1 2 3 4 8 9 10 11 12
       physical 3: cores 0 1 2 3 4 8 9 10 11 12
    cache size : 25600 KB

 From /proc/meminfo
    MemTotal:       529331624 kB
    HugePages_Total:       0
    Hugepagesize:       2048 kB

 /usr/bin/lsb_release -d
    SUSE Linux Enterprise Server 12

 From /etc/*release* /etc/*version*
    SuSE-release:
       SUSE Linux Enterprise Server 12 (x86_64)
       VERSION = 12
       PATCHLEVEL = 0
       # This file is deprecated and will be removed in a future service pack or
       release.
       # Please check /etc/os-release for details about this release.
    os-release:
       NAME="SLES"
       VERSION="12"
       VERSION_ID="12"
       PRETTY_NAME="SUSE Linux Enterprise Server 12"
       ID="sles"
       ANSI_COLOR="0;32"
       CPE_NAME="cpe:/o:suse:sles:12"

 uname -a:
    Linux 21-234 3.12.28-4-default #1 SMP Thu Sep 25 17:02:34 UTC 2014 (9879bd4)
    x86_64 x86_64 x86_64 GNU/Linux

 run-level 5 Jun 19 10:50

 SPEC is set to: /home/SPEC2K6/SPEC2006-V12
    Filesystem     Type  Size  Used Avail Use% Mounted on
    /dev/sda3      ext4  458G   76G  382G  17% /home
 Additional information from dmidecode:

    Warning: Use caution when you interpret this section. The 'dmidecode' program
    reads system data which is "intended to allow hardware to be accurately
    determined", but the intent may not be met, as there are frequent changes to
    hardware, firmware, and the "DMTF SMBIOS" standard.

   BIOS American Megatrends Inc. 1.00 06/01/2015
   Memory:
    16x NO DIMM NO DIMM
    1x Samsung(data:13/44) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    1x Samsung(data:13/48) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    3x Samsung(data:13/51) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    2x Samsung(data:14/13) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    1x Samsung(data:14/16) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    5x Samsung(data:14/17) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    1x Samsung(data:14/25) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    14x Samsung(data:14/26) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz
    4x Samsung(data:14/47) M393A2G40DB0-CPB 16 GB 2 rank 2133 MHz, configured at
    1866 MHz

 (End of data from sysinfo program)

General Notes

Environment variables set by runspec before the start of the run:
LD_LIBRARY_PATH = "/home/SPEC2K6/SPEC2006-V12/libs/32:/home/SPEC2K6/SPEC2006-V12/libs/64:/home/SPEC2K6/SPEC2006-V12/sh"

 Binaries compiled on a system with 1x Core i5-4670K CPU + 16GB
 memory using RedHat EL 7.0
 Transparent Huge Pages enabled with:
 echo always > /sys/kernel/mm/transparent_hugepage/enabled
 Filesystem page cache cleared with:
 echo 1>       /proc/sys/vm/drop_caches
 runspec command invoked through numactl i.e.:
 numactl --interleave=all runspec <etc>

Base Compiler Invocation

C benchmarks:

 icc -m64 

C++ benchmarks:

 icpc -m64 

Fortran benchmarks:

 ifort -m64 

Benchmarks using both Fortran and C:

 icc -m64   ifort -m64 

Base Portability Flags

410.bwaves:  -DSPEC_CPU_LP64 
416.gamess:  -DSPEC_CPU_LP64 
433.milc:  -DSPEC_CPU_LP64 
434.zeusmp:  -DSPEC_CPU_LP64 
435.gromacs:  -DSPEC_CPU_LP64   -nofor_main 
436.cactusADM:  -DSPEC_CPU_LP64   -nofor_main 
437.leslie3d:  -DSPEC_CPU_LP64 
444.namd:  -DSPEC_CPU_LP64 
447.dealII:  -DSPEC_CPU_LP64 
450.soplex:  -DSPEC_CPU_LP64 
453.povray:  -DSPEC_CPU_LP64 
454.calculix:  -DSPEC_CPU_LP64   -nofor_main 
459.GemsFDTD:  -DSPEC_CPU_LP64 
465.tonto:  -DSPEC_CPU_LP64 
470.lbm:  -DSPEC_CPU_LP64 
481.wrf:  -DSPEC_CPU_LP64   -DSPEC_CPU_CASE_FLAG   -DSPEC_CPU_LINUX 
482.sphinx3:  -DSPEC_CPU_LP64 

Base Optimization Flags

C benchmarks:

 -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-prefetch   -auto-p32   -ansi-alias   -opt-mem-layout-trans=3 

C++ benchmarks:

 -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-prefetch   -auto-p32   -ansi-alias   -opt-mem-layout-trans=3 

Fortran benchmarks:

 -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-prefetch 

Benchmarks using both Fortran and C:

 -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-prefetch   -auto-p32   -ansi-alias   -opt-mem-layout-trans=3 

Peak Compiler Invocation

C benchmarks:

 icc -m64 

C++ benchmarks (except as noted below):

 icpc -m64 
450.soplex:  icpc -m32 -L/opt/intel/composer_xe_2015/lib/ia32 

Fortran benchmarks:

 ifort -m64 

Benchmarks using both Fortran and C:

 icc -m64   ifort -m64 

Peak Portability Flags

410.bwaves:  -DSPEC_CPU_LP64 
416.gamess:  -DSPEC_CPU_LP64 
433.milc:  -DSPEC_CPU_LP64 
434.zeusmp:  -DSPEC_CPU_LP64 
435.gromacs:  -DSPEC_CPU_LP64   -nofor_main 
436.cactusADM:  -DSPEC_CPU_LP64   -nofor_main 
437.leslie3d:  -DSPEC_CPU_LP64 
444.namd:  -DSPEC_CPU_LP64 
447.dealII:  -DSPEC_CPU_LP64 
453.povray:  -DSPEC_CPU_LP64 
454.calculix:  -DSPEC_CPU_LP64   -nofor_main 
459.GemsFDTD:  -DSPEC_CPU_LP64 
465.tonto:  -DSPEC_CPU_LP64 
470.lbm:  -DSPEC_CPU_LP64 
481.wrf:  -DSPEC_CPU_LP64   -DSPEC_CPU_CASE_FLAG   -DSPEC_CPU_LINUX 
482.sphinx3:  -DSPEC_CPU_LP64 

Peak Optimization Flags

C benchmarks:

433.milc:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -opt-mem-layout-trans=3(pass 2)   -prof-use(pass 2)   -auto-ilp32 
470.lbm:  basepeak = yes 
482.sphinx3:  -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-mem-layout-trans=3   -unroll2 

C++ benchmarks:

444.namd:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -opt-mem-layout-trans=3(pass 2)   -prof-use(pass 2)   -fno-alias   -auto-ilp32 
447.dealII:  basepeak = yes 
450.soplex:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -opt-mem-layout-trans=3(pass 2)   -prof-use(pass 2)   -opt-malloc-options=3 
453.povray:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -opt-mem-layout-trans=3(pass 2)   -prof-use(pass 2)   -unroll4   -ansi-alias 

Fortran benchmarks:

410.bwaves:  basepeak = yes 
416.gamess:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -prof-use(pass 2)   -unroll2   -inline-level=0   -scalar-rep- 
434.zeusmp:  basepeak = yes 
437.leslie3d:  -xCORE-AVX2   -ipo   -O3   -no-prec-div   -opt-prefetch 
459.GemsFDTD:  basepeak = yes 
465.tonto:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -prof-use(pass 2)   -unroll4   -auto   -inline-calloc   -opt-malloc-options=3 

Benchmarks using both Fortran and C:

435.gromacs:  -xCORE-AVX2(pass 2)   -prof-gen(pass 1)   -ipo(pass 2)   -O3(pass 2)   -no-prec-div(pass 2)   -opt-mem-layout-trans=3(pass 2)   -prof-use(pass 2)   -opt-prefetch   -auto-ilp32 
436.cactusADM:  basepeak = yes 
454.calculix:  basepeak = yes 
481.wrf:  -xCORE-AVX2   -ipo   -O3   -no-prec-div   -auto-ilp32 

The flags files that were used to format this result can be browsed at
http://www.spec.org/cpu2006/flags/Intel-ic15.0-official-linux64.html,
http://www.spec.org/cpu2006/flags/Supermicro-Platform-Settings-V1.2-revG.20141230.00.html.

You can also download the XML flags sources by saving the following links:
http://www.spec.org/cpu2006/flags/Intel-ic15.0-official-linux64.xml,
http://www.spec.org/cpu2006/flags/Supermicro-Platform-Settings-V1.2-revG.20141230.00.xml.