MPI2007 license: | 13 | Test date: | Nov-2010 |
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Test sponsor: | Intel Corporation | Hardware Availability: | Mar-2010 |
Tested by: | Pavel Shelepugin | Software Availability: | Nov-2010 |
Benchmark | Base | Peak | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ranks | Seconds | Ratio | Seconds | Ratio | Seconds | Ratio | Ranks | Seconds | Ratio | Seconds | Ratio | Seconds | Ratio | |
Results appear in the order in which they were run. Bold underlined text indicates a median measurement. | ||||||||||||||
121.pop2 | 3072 | 103 | 37.7 | 86.4 | 45.0 | 88.7 | 43.9 | 2048 | 77.1 | 50.4 | 77.7 | 50.1 | 77.3 | 50.3 |
122.tachyon | 3072 | 937 | 2.08 | 73.5 | 26.5 | 73.3 | 26.5 | 3072 | 938 | 2.07 | 67.2 | 28.9 | 67.1 | 29.0 |
125.RAxML | 3072 | 127 | 23.0 | 127 | 22.9 | 127 | 22.9 | 3072 | 126 | 23.2 | 125 | 23.3 | 125 | 23.3 |
126.lammps | 3072 | 42.2 | 58.3 | 39.6 | 62.1 | 40.2 | 61.2 | 3072 | 42.9 | 57.4 | 38.6 | 63.6 | 38.7 | 63.5 |
128.GAPgeofem | 3072 | 189 | 31.4 | 190 | 31.3 | 194 | 30.5 | 3072 | 195 | 30.5 | 192 | 30.9 | 184 | 32.3 |
129.tera_tf | 3072 | 48.6 | 22.6 | 44.0 | 25.0 | 45.9 | 24.0 | 3072 | 42.5 | 25.8 | 41.9 | 26.2 | 42.0 | 26.2 |
132.zeusmp2 | 3072 | 41.8 | 50.7 | 43.0 | 49.3 | 42.1 | 50.3 | 2048 | 39.7 | 53.4 | 40.0 | 53.0 | 40.2 | 52.8 |
137.lu | 3072 | 38.3 | 110 | 38.9 | 108 | 39.4 | 107 | 2048 | 34.4 | 122 | 34.6 | 121 | 34.6 | 121 |
142.dmilc | 3072 | 24.6 | 150 | 24.8 | 148 | 24.7 | 149 | 3072 | 24.2 | 152 | 24.1 | 153 | 24.4 | 151 |
143.dleslie | 3072 | 831 | 3.73 | 826 | 3.75 | 828 | 3.74 | 2048 | 32.9 | 94.1 | 31.9 | 97.3 | 31.3 | 99.2 |
145.lGemsFDTD | 3072 | 111 | 39.7 | 110 | 40.1 | 127 | 34.8 | 2048 | 104 | 42.6 | 114 | 38.6 | 103 | 42.8 |
147.l2wrf2 | 3072 | 125 | 65.4 | 126 | 64.9 | 126 | 64.9 | 3072 | 128 | 64.0 | 137 | 59.8 | 122 | 67.1 |
Hardware Summary | |
---|---|
Type of System: | Homogeneous |
Compute Node: | Endeavor Node |
Interconnects: | IB Switch Gigabit Ethernet |
File Server Node: | NFS |
Total Compute Nodes: | 256 |
Total Chips: | 512 |
Total Cores: | 3072 |
Total Threads: | 6144 |
Total Memory: | 6 TB |
Base Ranks Run: | 3072 |
Minimum Peak Ranks: | 2048 |
Maximum Peak Ranks: | 3072 |
Software Summary | |
---|---|
C Compiler: | Intel C++ Compiler 12.0.0.072 for Linux |
C++ Compiler: | Intel C++ Compiler 12.0.0.072 for Linux |
Fortran Compiler: | Intel Fortran Compiler 12.0.0.072 for Linux |
Base Pointers: | 64-bit |
Peak Pointers: | 64-bit |
MPI Library: | Intel MPI Library 4.0.1.005 for Linux |
Other MPI Info: | None |
Pre-processors: | No |
Other Software: | None |
Hardware | |
---|---|
Number of nodes: | 256 |
Uses of the node: | compute |
Vendor: | Intel |
Model: | SR1600UR |
CPU Name: | Intel Xeon X5670 |
CPU(s) orderable: | 1-2 chips |
Chips enabled: | 2 |
Cores enabled: | 12 |
Cores per chip: | 6 |
Threads per core: | 2 |
CPU Characteristics: | Intel Turbo Boost Technology disabled, 6.4 GT/s QPI, Hyper-Threading enabled |
CPU MHz: | 2934 |
Primary Cache: | 32 KB I + 32 KB D on chip per core |
Secondary Cache: | 256 KB I+D on chip per core |
L3 Cache: | 12 MB I+D on chip per chip, 12 MB shared / 6 cores |
Other Cache: | None |
Memory: | 24 GB (Dual-rank RDIMM 6x4-GB DDR3-1333 MHz) |
Disk Subsystem: | Seagate 400 GB ST3400755SS |
Other Hardware: | None |
Adapter: | Intel (ESB2) 82575EB Dual-Port Gigabit Ethernet Controller |
Number of Adapters: | 1 |
Slot Type: | PCI-Express x8 |
Data Rate: | 1Gbps Ethernet |
Ports Used: | 2 |
Interconnect Type: | Ethernet |
Adapter: | Mellanox MHQH29-XTC |
Number of Adapters: | 1 |
Slot Type: | PCIe x8 Gen2 |
Data Rate: | InfiniBand 4x QDR |
Ports Used: | 1 |
Interconnect Type: | InfiniBand |
Software | |
---|---|
Adapter: | Intel (ESB2) 82575EB Dual-Port Gigabit Ethernet Controller |
Adapter Driver: | e1000 |
Adapter Firmware: | None |
Adapter: | Mellanox MHQH29-XTC |
Adapter Driver: | OFED 1.4.2 |
Adapter Firmware: | 2.7.000 |
Operating System: | Red Hat EL 5.4, kernel 2.6.18-164 |
Local File System: | Linux/ext2 |
Shared File System: | NFS |
System State: | Multi-User |
Other Software: | PBS Pro 10.1 |
Hardware | |
---|---|
Number of nodes: | 1 |
Uses of the node: | fileserver |
Vendor: | Intel |
Model: | S7000FC4UR |
CPU Name: | Intel Xeon CPU |
CPU(s) orderable: | 1-4 chips |
Chips enabled: | 4 |
Cores enabled: | 16 |
Cores per chip: | 4 |
Threads per core: | 2 |
CPU Characteristics: | -- |
CPU MHz: | 2926 |
Primary Cache: | 32 KB I + 32 KB D on chip per core |
Secondary Cache: | 8 MB I+D on chip per chip, 4 MB shared / 2 cores |
L3 Cache: | None |
Other Cache: | None |
Memory: | 64 GB |
Disk Subsystem: | 8 disks, 500GB/disk, 2.7TB total |
Other Hardware: | None |
Adapter: | Intel 82563GB Dual-Port Gigabit Ethernet Controller |
Number of Adapters: | 1 |
Slot Type: | PCI-Express x8 |
Data Rate: | 1Gbps Ethernet |
Ports Used: | 1 |
Interconnect Type: | Ethernet |
Software | |
---|---|
Adapter: | Intel 82563GB Dual-Port Gigabit Ethernet Controller |
Adapter Driver: | e1000e |
Adapter Firmware: | N/A |
Operating System: | RedHat EL 5 Update 4 |
Local File System: | None |
Shared File System: | NFS |
System State: | Multi-User |
Other Software: | None |
Hardware | |
---|---|
Vendor: | Mellanox |
Model: | Mellanox MTS3600Q-1UNC |
Switch Model: | Mellanox MTS3600Q-1UNC |
Number of Switches: | 46 |
Number of Ports: | 36 |
Data Rate: | InfiniBand 4x QDR |
Firmware: | 7.1.000 |
Topology: | Fat tree |
Primary Use: | MPI traffic |
Hardware | |
---|---|
Vendor: | Force10 Networks |
Model: | Force10 S50, Force10 C300 |
Switch Model: | Force10 S50, Force10 C300 |
Number of Switches: | 15 |
Number of Ports: | 48 |
Data Rate: | 1Gbps Ethernet |
Firmware: | 8.2.1.0 |
Topology: | Fat tree |
Primary Use: | Cluster File System |
The config file option 'submit' was used.
MPI startup command: mpiexec.hydra command was used to start MPI jobs. To start a job by this command, the daemons are not required to be run beforehand. BIOS settings: Intel Hyper-Threading Technology (SMT): Enabled (default is Enabled) Intel Turbo Boost Technology (Turbo) : Disabled (default is Enabled) RAM configuration: Compute nodes have 1x4-GB RDIMM on each memory channel. Network: Forty six 36-port switches: 18 core switches and 28 leaf switches. Each leaf has one link to each core. Remaining 18 ports on 25 of 28 leafs are used for compute nodes. On the remaining 3 leafs the ports are used for FS nodes and other peripherals. Job placement: Each MPI job was assigned to a topologically compact set of nodes, i.e. the minimal needed number of leaf switches was used for each job: 1 switch for 96/192 ranks, 2 switches for 384 ranks, 4 switches for 768 ranks, 8 switches for 1536 ranks, 15 switches for 3072 ranks. PBS Pro was used for job submission. It has no impact on performance. Can be found at: http://www.altair.com
mpiicc |
126.lammps: | mpiicpc |
mpiifort |
mpiicc mpiifort |
121.pop2: | -DSPEC_MPI_CASE_FLAG |
126.lammps: | -DMPICH_IGNORE_CXX_SEEK |
-O3 -xSSE4.2 -no-prec-div |
126.lammps: | -O3 -xSSE4.2 -no-prec-div |
-O3 -xSSE4.2 -no-prec-div |
-O3 -xSSE4.2 -no-prec-div |
-O3 -xSSE4.2 -no-prec-div -ipo |
126.lammps: | -O3 -xSSE4.2 -no-prec-div -ipo |
-O3 -xSSE4.2 -no-prec-div -ipo |
121.pop2: | -O3 -xSSE4.2 -no-prec-div -ipo |
128.GAPgeofem: | -O3 -xSSE4.2 -no-prec-div |
132.zeusmp2: | Same as 121.pop2 |
147.l2wrf2: | Same as 121.pop2 |